Wednesday, March 7, 2012

miR-Seq

Summary

The purpose of miR-Seq is to quantify the free or total amount of miRNAs in a sample.

Library Prep

Data Analysis

  • Trim reads to remove adapter
  • Align unique sequences to precursor hairpins, RefSeq RNAs, and the genome.
  • When there are 3 or replicates we can do quantile normalization and differential expression analysis.

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